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CDK Debugging

posted by cyrus in Computational Biology

[Well, this is more computational chemistry than computational biology, but I didn't want this to show up on planet.lisp.org, so I'm using this category]

If you want to turn on logging with CDK, the magic JVM incantation arguments are:

-Dcdk.debugging=true -Dcdk.debug.stdout=true 

I'm not sure how to get logging for only a single class yet. Perhaps that will be next. In the meantime, at least basic logging works for me in Eclipse now.

CDK Debugging

Comparative Analysis of Spatial Patterns of Gene Expression in Drosophila melanogaster Imaginal Discs

posted by cyrus in Computational Biology

The slides from my recent RECOMB2007 talk Comparative Analysis of Spatial Patterns of Gene Expression in Drosophila melanogaster Imaginal Discs can be found here .

Comparative Analysis of Spatial Patterns of Gene Expression in Drosophila melanogaster Imaginal Discs